Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus ratkowskyi |
| Strain | strain DSM 22686 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | saline lake cyanobacterial mats; sea ice |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1516046 bp
Thymine Count
1505068 bp
Guanine Count
980277 bp
Cytosine Count
983951 bp
Genome Length
4994706 bp
Protein-coding Genes
4263 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | LV84_01741 | Not Available | Negative | 1967132 - 1967413 | 10176.4 |
| dna-binding response ompr family regulator | LV84_01742 | Not Available | Positive | 1967700 - 1968374 | 25507.6 |
| signal transduction histidine kinase | LV84_01743 | Not Available | Positive | 1968371 - 1969660 | 49358.2 |
| putative pepsy-like beta-lactamase-inhibitor | LV84_01744 | Not Available | Positive | 1969720 - 1970181 | 17197.8 |
| outer membrane receptor protein involved in fe transport | LV84_01745 | Not Available | Positive | 1970171 - 1972579 | 89940.2 |
| putative membrane-anchored protein | LV84_01746 | Not Available | Positive | 1972581 - 1973375 | 29648.9 |
| glycosyltransferase involved in cell wall biosynthesis | LV84_01747 | Not Available | Positive | 1973453 - 1974205 | 28376.4 |
| 4-amino-4-deoxy-l-arabinose transferase-like glycosyltransferase | LV84_01748 | Not Available | Positive | 1974198 - 1976468 | 87044.8 |
| hypothetical protein | LV84_01749 | Not Available | Positive | 1976805 - 1977191 | 15086.1 |
| relaxase/mobilization nuclease-like protein | LV84_01750 | Not Available | Positive | 1977239 - 1978462 | 45912.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
