Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus ratkowskyi |
| Strain | strain DSM 22686 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | saline lake cyanobacterial mats; sea ice |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1516046 bp
Thymine Count
1505068 bp
Guanine Count
980277 bp
Cytosine Count
983951 bp
Genome Length
4994706 bp
Protein-coding Genes
4263 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytochrome oxidase cu insertion factor (sco1/senc/prrc family) | LV84_01731 | Not Available | Positive | 1955163 - 1956833 | 63507.5 |
| tonb-linked susc/raga family outer membrane protein | LV84_01732 | Not Available | Positive | 1956847 - 1960053 | 120881.0 |
| susd-like starch-binding protein associating with outer membrane | LV84_01733 | Not Available | Positive | 1960198 - 1961547 | 50700.6 |
| hypothetical protein | LV84_01734 | Not Available | Negative | 1961623 - 1961874 | 8966.57 |
| hypothetical protein | LV84_01735 | Not Available | Negative | 1962257 - 1962703 | 16982.1 |
| crp-like camp-binding protein | LV84_01736 | Not Available | Positive | 1962999 - 1964552 | 60392.4 |
| rtec protein | LV84_01737 | Not Available | Positive | 1964576 - 1965424 | 33534.1 |
| rtec protein | LV84_01738 | Not Available | Positive | 1965526 - 1966362 | 32705.4 |
| hypothetical protein | LV84_01739 | Not Available | Positive | 1966374 - 1966763 | 14757.5 |
| hypothetical protein | LV84_01740 | Not Available | Negative | 1966868 - 1967128 | 10108.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
