Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus ratkowskyi |
| Strain | strain DSM 22686 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | saline lake cyanobacterial mats; sea ice |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1516046 bp
Thymine Count
1505068 bp
Guanine Count
980277 bp
Cytosine Count
983951 bp
Genome Length
4994706 bp
Protein-coding Genes
4263 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | LV84_01721 | Not Available | Positive | 1943205 - 1943588 | 13798.5 |
| uncharacterized protein duf4917 | LV84_01722 | Not Available | Positive | 1943663 - 1944745 | 40768.3 |
| type i restriction enzyme m protein | LV84_01723 | Not Available | Positive | 1944939 - 1946507 | 59019.0 |
| type i restriction enzyme s subunit | LV84_01724 | Not Available | Positive | 1946511 - 1947749 | 47506.0 |
| frg domain-containing protein | LV84_01725 | Not Available | Positive | 1947756 - 1949504 | 69082.8 |
| type i restriction enzyme r subunit | LV84_01726 | Not Available | Positive | 1949506 - 1952376 | 111039.0 |
| putative phage abortive infection protein | LV84_01727 | Not Available | Positive | 1952387 - 1953334 | 37249.3 |
| hypothetical protein | LV84_01728 | Not Available | Positive | 1953400 - 1954032 | 24560.3 |
| dna-binding xre family transcriptional regulator | LV84_01729 | Not Available | Negative | 1954142 - 1954402 | 9716.92 |
| hypothetical protein | LV84_01730 | Not Available | Positive | 1954710 - 1954904 | 7020.65 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
