Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus ratkowskyi |
| Strain | strain DSM 22686 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | saline lake cyanobacterial mats; sea ice |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1516046 bp
Thymine Count
1505068 bp
Guanine Count
980277 bp
Cytosine Count
983951 bp
Genome Length
4994706 bp
Protein-coding Genes
4263 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyltransferase involved in cell wall biosynthesis | LV84_01691 | Not Available | Negative | 1910830 - 1911978 | 42591.7 |
| glycosyltransferase involved in cell wall biosynthesis | LV84_01692 | Not Available | Negative | 1911993 - 1913120 | 42759.0 |
| methyltransferase family protein | LV84_01693 | Not Available | Negative | 1913267 - 1914172 | 35339.5 |
| ubiquinone/menaquinone biosynthesis c-methylase ubie | LV84_01694 | Not Available | Negative | 1914199 - 1915074 | 33921.1 |
| hypothetical protein | LV84_01695 | Not Available | Negative | 1915071 - 1916483 | 53247.9 |
| hypothetical protein | LV84_01696 | Not Available | Negative | 1916474 - 1917409 | 35550.7 |
| pst family polysaccharide transporter | LV84_01697 | Not Available | Negative | 1917393 - 1918682 | 48338.4 |
| chain length determinant protein | LV84_01698 | Not Available | Negative | 1918696 - 1919763 | 39697.9 |
| protein involved in polysaccharide export with slbb domain | LV84_01699 | Not Available | Negative | 1919763 - 1922336 | 94834.2 |
| hypothetical protein | LV84_01700 | Not Available | Positive | 1922617 - 1922838 | 8211.81 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
