Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus ratkowskyi |
| Strain | strain DSM 22686 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | saline lake cyanobacterial mats; sea ice |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1516046 bp
Thymine Count
1505068 bp
Guanine Count
980277 bp
Cytosine Count
983951 bp
Genome Length
4994706 bp
Protein-coding Genes
4263 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein sco1/2 | LV84_00157 | Not Available | Negative | 202641 - 203354 | 27027.1 |
| morn repeat protein | LV84_00158 | Not Available | Negative | 203317 - 203925 | 23090.8 |
| yhyh protein | LV84_00159 | Not Available | Negative | 203912 - 204745 | 29721.4 |
| hypothetical protein | LV84_00160 | Not Available | Negative | 204769 - 205251 | 18195.4 |
| hypothetical protein | LV84_00161 | Not Available | Negative | 205248 - 205529 | 10387.3 |
| rna polymerase sigma-70 factor (ecf subfamily) | LV84_00162 | Not Available | Negative | 205549 - 206136 | 22701.9 |
| uracil-dna glycosylase | LV84_00163 | Not Available | Negative | 206289 - 206870 | 22419.3 |
| uncharacterized protein duf4136 | LV84_00164 | Not Available | Positive | 207093 - 207677 | 22528.9 |
| chemotaxis protein motb | LV84_00165 | Not Available | Positive | 207895 - 208743 | 31467.0 |
| outer membrane protein | LV84_00166 | Not Available | Negative | 209150 - 210499 | 51263.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
