Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus ratkowskyi |
| Strain | strain DSM 22686 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | saline lake cyanobacterial mats; sea ice |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1516046 bp
Thymine Count
1505068 bp
Guanine Count
980277 bp
Cytosine Count
983951 bp
Genome Length
4994706 bp
Protein-coding Genes
4263 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| diaminopimelate decarboxylase | LV84_01681 | Not Available | Negative | 1899991 - 1901223 | 45171.7 |
| two-component system phosphate regulon sensor histidine kinase phor | LV84_01682 | Not Available | Positive | 1901436 - 1903157 | 65714.3 |
| dna-binding response ompr family regulator | LV84_01683 | Not Available | Positive | 1903154 - 1903849 | 26507.2 |
| l-alanine-dl-glutamate epimerase-like enolase superfamily enzyme | LV84_01684 | Not Available | Negative | 1904016 - 1905095 | 40190.1 |
| zinc carboxypeptidase | LV84_01685 | Not Available | Positive | 1905122 - 1906603 | 55618.8 |
| hypothetical protein | LV84_01686 | Not Available | Positive | 1906702 - 1907433 | 27040.0 |
| complex i intermediate-associated protein 30 (cia30) | LV84_01687 | Not Available | Positive | 1907499 - 1907999 | 18769.3 |
| 23s rrna (adenine1618-n6)-methyltransferase | LV84_01688 | Not Available | Positive | 1908116 - 1909069 | 36455.5 |
| osmotically inducible protein osmc | LV84_01689 | Not Available | Negative | 1909197 - 1909610 | 14738.4 |
| glycosyltransferase involved in cell wall biosynthesis | LV84_01690 | Not Available | Negative | 1909679 - 1910854 | 44954.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
