Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus ratkowskyi |
| Strain | strain DSM 22686 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | saline lake cyanobacterial mats; sea ice |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1516046 bp
Thymine Count
1505068 bp
Guanine Count
980277 bp
Cytosine Count
983951 bp
Genome Length
4994706 bp
Protein-coding Genes
4263 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transglycosylase-like protein with slt domain | LV84_01660 | Not Available | Positive | 1874163 - 1875101 | 35923.3 |
| excinuclease abc subunit a | LV84_01661 | Not Available | Positive | 1875327 - 1878158 | 105237.0 |
| histidine kinase | LV84_01662 | Not Available | Positive | 1878215 - 1879291 | 41252.6 |
| lyttr family two component transcriptional regulator | LV84_01663 | Not Available | Positive | 1879306 - 1880040 | 28166.8 |
| lyttr family two component transcriptional regulator | LV84_01664 | Not Available | Positive | 1880163 - 1880918 | 28497.5 |
| hypothetical protein | LV84_01665 | Not Available | Positive | 1881169 - 1881399 | 8740.69 |
| hypothetical protein | LV84_01666 | Not Available | Negative | 1881445 - 1881867 | 17112.0 |
| phoh-like atpase | LV84_01667 | Not Available | Negative | 1881965 - 1883311 | 51350.8 |
| helicase-like protein | LV84_01668 | Not Available | Negative | 1883492 - 1886452 | 113394.0 |
| signal peptidase ii | LV84_01669 | Not Available | Negative | 1886649 - 1887281 | 24029.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
