Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus ratkowskyi |
| Strain | strain DSM 22686 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | saline lake cyanobacterial mats; sea ice |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1516046 bp
Thymine Count
1505068 bp
Guanine Count
980277 bp
Cytosine Count
983951 bp
Genome Length
4994706 bp
Protein-coding Genes
4263 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-linked susc/raga family outer membrane protein | LV84_01640 | Not Available | Negative | 1852362 - 1855535 | 116667.0 |
| uncharacterized protein duf3365 | LV84_01641 | Not Available | Negative | 1855778 - 1856428 | 23936.5 |
| putative secreted protein (por secretion system target) | LV84_01642 | Not Available | Positive | 1856675 - 1859491 | 100600.0 |
| rimj/riml family protein n-acetyltransferase | LV84_01643 | Not Available | Negative | 1859506 - 1860030 | 20288.2 |
| peptide chain release factor 1 | LV84_01644 | Not Available | Negative | 1860115 - 1861194 | 40672.2 |
| kazal-type serine protease inhibitor-like protein | LV84_01645 | Not Available | Positive | 1861309 - 1861533 | 8133.75 |
| glucosamine--fructose-6-phosphate aminotransferase (isomerizing) | LV84_01646 | Not Available | Negative | 1861566 - 1863407 | 67825.5 |
| uncharacterized protein duf4270 | LV84_01647 | Not Available | Negative | 1863529 - 1864914 | 50361.4 |
| starch synthase | LV84_01648 | Not Available | Negative | 1864874 - 1865692 | 31316.8 |
| pantoate--beta-alanine ligase | LV84_01649 | Not Available | Positive | 1865821 - 1866669 | 32541.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
