Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus ratkowskyi |
| Strain | strain DSM 22686 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | saline lake cyanobacterial mats; sea ice |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1516046 bp
Thymine Count
1505068 bp
Guanine Count
980277 bp
Cytosine Count
983951 bp
Genome Length
4994706 bp
Protein-coding Genes
4263 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nucleoside-diphosphate-sugar epimerase | LV84_01630 | Not Available | Positive | 1840243 - 1841067 | 30841.1 |
| pp_01609 | LV84_01631 | Not Available | Negative | 1841064 - 1841402 | Not Available |
| hypothetical protein | LV84_01632 | Not Available | Positive | 1841475 - 1841828 | 13215.8 |
| 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase | LV84_01633 | Not Available | Negative | 1841886 - 1842620 | 27427.9 |
| photosystem ii stability/assembly factor-like uncharacterized protein | LV84_01634 | Not Available | Negative | 1842775 - 1843809 | 36755.3 |
| hydroxypyruvate isomerase | LV84_01635 | Not Available | Negative | 1843821 - 1844732 | 33602.7 |
| secreted protein | LV84_01636 | Not Available | Negative | 1844735 - 1846045 | 48473.6 |
| formylglycine-generating enzyme required for sulfatase activity | LV84_01637 | Not Available | Negative | 1846063 - 1847046 | 37168.7 |
| vcbs repeat protein | LV84_01638 | Not Available | Negative | 1847074 - 1850424 | 122791.0 |
| putative outer membrane starch-binding protein | LV84_01639 | Not Available | Negative | 1850490 - 1852349 | 69141.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
