Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus ratkowskyi |
| Strain | strain DSM 22686 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | saline lake cyanobacterial mats; sea ice |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1516046 bp
Thymine Count
1505068 bp
Guanine Count
980277 bp
Cytosine Count
983951 bp
Genome Length
4994706 bp
Protein-coding Genes
4263 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | LV84_01600 | Not Available | Negative | 1807754 - 1808038 | 10934.2 |
| hth-type transcriptional regulator/antitoxin higa | LV84_01601 | Not Available | Negative | 1808070 - 1808438 | 13746.7 |
| mrna interferase higb | LV84_01602 | Not Available | Negative | 1808438 - 1808743 | 12067.4 |
| release factor glutamine methyltransferase | LV84_01603 | Not Available | Negative | 1808768 - 1809607 | 31753.0 |
| 16s rrna (cytosine967-c5)-methyltransferase | LV84_01604 | Not Available | Positive | 1809751 - 1810962 | 46101.4 |
| imp dehydrogenase | LV84_01605 | Not Available | Positive | 1811106 - 1812584 | 53013.2 |
| res domain-containing protein | LV84_01606 | Not Available | Negative | 1812686 - 1813009 | 12148.6 |
| putative toxin-antitoxin system antitoxin component (tigr02293 family) | LV84_01607 | Not Available | Negative | 1813148 - 1813615 | 17655.0 |
| l-amino acid n-acyltransferase ynca | LV84_01608 | Not Available | Negative | 1813706 - 1814182 | 18313.9 |
| type iii pantothenate kinase | LV84_01609 | Not Available | Positive | 1814245 - 1815015 | 28344.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
