Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus ratkowskyi |
| Strain | strain DSM 22686 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | saline lake cyanobacterial mats; sea ice |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1516046 bp
Thymine Count
1505068 bp
Guanine Count
980277 bp
Cytosine Count
983951 bp
Genome Length
4994706 bp
Protein-coding Genes
4263 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thiamine biosynthesis lipoprotein | LV84_01580 | Not Available | Positive | 1783839 - 1784909 | 39060.7 |
| zinc transporter zupt | LV84_01581 | Not Available | Positive | 1784998 - 1785753 | 27741.5 |
| putative solute:sodium symporter small subunit | LV84_01582 | Not Available | Positive | 1785942 - 1786205 | 10394.8 |
| cation/acetate symporter | LV84_01583 | Not Available | Positive | 1786225 - 1787910 | 60219.0 |
| acetyl-coa synthetase | LV84_01584 | Not Available | Positive | 1787958 - 1789850 | 71007.7 |
| cbs domain-containing protein | LV84_01585 | Not Available | Positive | 1789916 - 1791859 | 73001.5 |
| dna polymerase-3 subunit epsilon | LV84_01586 | Not Available | Positive | 1791856 - 1792536 | 25486.8 |
| uncharacterized protein duf4403 | LV84_01587 | Not Available | Negative | 1792601 - 1794004 | 50942.0 |
| bacillithiol system protein ytxj | LV84_01588 | Not Available | Positive | 1794076 - 1794411 | 12685.3 |
| outer membrane receptor protein involved in fe transport | LV84_01589 | Not Available | Positive | 1794538 - 1797399 | 104940.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
