Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus ratkowskyi |
| Strain | strain DSM 22686 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | saline lake cyanobacterial mats; sea ice |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1516046 bp
Thymine Count
1505068 bp
Guanine Count
980277 bp
Cytosine Count
983951 bp
Genome Length
4994706 bp
Protein-coding Genes
4263 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | LV84_01560 | Not Available | Negative | 1765549 - 1765737 | 7114.49 |
| comf family protein | LV84_01561 | Not Available | Positive | 1765819 - 1766511 | 25906.9 |
| dinb family protein | LV84_01562 | Not Available | Positive | 1766508 - 1767050 | 21277.6 |
| nad(p)-dependent dehydrogenase (short-subunit alcohol dehydrogenase family) | LV84_01563 | Not Available | Positive | 1767113 - 1767871 | 27134.4 |
| hypothetical protein | LV84_01564 | Not Available | Positive | 1767902 - 1768495 | 23077.0 |
| uncharacterized protein (tigr00369 family) | LV84_01565 | Not Available | Positive | 1768500 - 1768955 | 16400.0 |
| hypothetical protein | LV84_01566 | Not Available | Positive | 1768983 - 1769390 | 15395.4 |
| spou rrna methylase family protein | LV84_01567 | Not Available | Negative | 1769387 - 1769905 | 19105.1 |
| dna mismatch repair protein muts | LV84_01568 | Not Available | Positive | 1770010 - 1772613 | 97832.4 |
| regulatory luxr family protein | LV84_01569 | Not Available | Positive | 1773177 - 1773359 | 6868.74 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
