Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus ratkowskyi |
| Strain | strain DSM 22686 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | saline lake cyanobacterial mats; sea ice |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1516046 bp
Thymine Count
1505068 bp
Guanine Count
980277 bp
Cytosine Count
983951 bp
Genome Length
4994706 bp
Protein-coding Genes
4263 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dgtpase | LV84_01539 | Not Available | Positive | 1741372 - 1742721 | 50389.6 |
| putative glyoxalase superfamily protein phnb | LV84_01540 | Not Available | Negative | 1742682 - 1743101 | 15441.7 |
| uncharacterized protein involved in outer membrane biogenesis | LV84_01541 | Not Available | Positive | 1743346 - 1746354 | 109331.0 |
| uncharacterized protein ybar (trm112 family) | LV84_01542 | Not Available | Negative | 1746384 - 1746647 | 10261.5 |
| thiamine-phosphate pyrophosphorylase | LV84_01543 | Not Available | Negative | 1746756 - 1747400 | 23675.5 |
| hydrogenase maturation factor | LV84_01544 | Not Available | Negative | 1747397 - 1748449 | 37026.5 |
| methyltransferase family protein | LV84_01545 | Not Available | Negative | 1748449 - 1749171 | 28329.0 |
| putative transcriptional regulator ydee | LV84_01547 | Not Available | Negative | 1749683 - 1750171 | 18130.3 |
| alkylation response protein aidb-like acyl-coa dehydrogenase | LV84_01548 | Not Available | Negative | 1750339 - 1752132 | 65761.5 |
| acetyl-coa acyltransferase | LV84_01549 | Not Available | Negative | 1752284 - 1753459 | 41574.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
