Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus ratkowskyi |
| Strain | strain DSM 22686 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | saline lake cyanobacterial mats; sea ice |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1516046 bp
Thymine Count
1505068 bp
Guanine Count
980277 bp
Cytosine Count
983951 bp
Genome Length
4994706 bp
Protein-coding Genes
4263 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| voltage-gated potassium channel | LV84_01529 | Not Available | Negative | 1730056 - 1730865 | 30193.9 |
| udp-n-acetylmuramoyl-tripeptide--d-alanyl-d- alanine ligase | LV84_01530 | Not Available | Negative | 1730902 - 1733364 | 91308.8 |
| hypothetical protein | LV84_01531 | Not Available | Negative | 1733348 - 1734430 | 41424.6 |
| condensin subunit scpa | LV84_01532 | Not Available | Negative | 1734434 - 1735183 | 29032.5 |
| 1-deoxy-d-xylulose-5-phosphate synthase | LV84_01533 | Not Available | Positive | 1735360 - 1737276 | 69943.1 |
| pimeloyl-acp methyl ester carboxylesterase | LV84_01534 | Not Available | Positive | 1737281 - 1738060 | 29076.0 |
| gaf domain-containing protein | LV84_01535 | Not Available | Negative | 1738057 - 1738539 | 17360.7 |
| diaminohydroxyphosphoribosylaminopyrimidine deaminase | LV84_01536 | Not Available | Negative | 1738532 - 1739557 | 38407.3 |
| uncharacterized protein duf4382 | LV84_01537 | Not Available | Negative | 1739557 - 1740354 | 29398.2 |
| uncharacterized protein duf4382 | LV84_01538 | Not Available | Negative | 1740457 - 1741272 | 29757.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
