Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus ratkowskyi |
| Strain | strain DSM 22686 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | saline lake cyanobacterial mats; sea ice |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1516046 bp
Thymine Count
1505068 bp
Guanine Count
980277 bp
Cytosine Count
983951 bp
Genome Length
4994706 bp
Protein-coding Genes
4263 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative tim-barrel fold metal-dependent hydrolase | LV84_01519 | Not Available | Negative | 1719461 - 1720579 | 42333.2 |
| zinc carboxypeptidase | LV84_01520 | Not Available | Negative | 1720687 - 1723242 | 95088.1 |
| phospholipase d-like protein | LV84_01521 | Not Available | Positive | 1723336 - 1723608 | 10664.3 |
| phospholipase d-like protein | LV84_01522 | Not Available | Positive | 1723605 - 1723835 | 8537.9 |
| hypothetical protein | LV84_01523 | Not Available | Positive | 1724078 - 1724359 | 10882.6 |
| abc-type lipopolysaccharide export system atpase subunit | LV84_01524 | Not Available | Positive | 1724365 - 1725033 | 24658.9 |
| hypothetical protein | LV84_01525 | Not Available | Negative | 1725071 - 1725961 | 32283.2 |
| h+/cl- antiporter clca | LV84_01526 | Not Available | Positive | 1726257 - 1727468 | 43861.7 |
| potassium uptake trkh family protein | LV84_01527 | Not Available | Positive | 1727496 - 1729310 | 66920.5 |
| trk system potassium uptake protein trka | LV84_01528 | Not Available | Positive | 1729370 - 1730059 | 25531.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
