Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus ratkowskyi |
| Strain | strain DSM 22686 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | saline lake cyanobacterial mats; sea ice |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1516046 bp
Thymine Count
1505068 bp
Guanine Count
980277 bp
Cytosine Count
983951 bp
Genome Length
4994706 bp
Protein-coding Genes
4263 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tfox-like protein | LV84_01508 | Not Available | Negative | 1710479 - 1710847 | 14398.4 |
| 2-dehydro-3-deoxy-d-arabinonate dehydratase | LV84_01509 | Not Available | Negative | 1711094 - 1711939 | 30928.6 |
| iron complex outermembrane receptor protein | LV84_01511 | Not Available | Positive | 1712333 - 1714720 | 89359.5 |
| hypothetical protein | LV84_01512 | Not Available | Positive | 1714893 - 1715144 | 9427.16 |
| toxin yoeb | LV84_01513 | Not Available | Positive | 1715141 - 1715416 | 10488.7 |
| hypothetical protein | LV84_01514 | Not Available | Negative | 1715468 - 1715953 | 18110.5 |
| polyisoprenoid-binding protein ycei | LV84_01515 | Not Available | Negative | 1715997 - 1716629 | 23868.7 |
| protocatechuate 3,4-dioxygenase beta subunit | LV84_01516 | Not Available | Negative | 1716622 - 1717242 | 23312.8 |
| lyttr family transcriptional regulator | LV84_01517 | Not Available | Negative | 1717318 - 1718139 | 31591.1 |
| fic family protein | LV84_01518 | Not Available | Negative | 1718145 - 1719212 | 40720.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
