Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus ratkowskyi |
| Strain | strain DSM 22686 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | saline lake cyanobacterial mats; sea ice |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1516046 bp
Thymine Count
1505068 bp
Guanine Count
980277 bp
Cytosine Count
983951 bp
Genome Length
4994706 bp
Protein-coding Genes
4263 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| virulence rhum family protein | LV84_00137 | Not Available | Positive | 172001 - 172870 | 33506.4 |
| exopolyphosphatase/guanosine-5'-triphosphate, 3'-diphosphate pyrophosphatase | LV84_00138 | Not Available | Negative | 173119 - 174651 | 57055.5 |
| cell filamentation protein | LV84_00139 | Not Available | Positive | 175033 - 175920 | 34193.9 |
| hypothetical protein | LV84_00140 | Not Available | Positive | 176428 - 176595 | 6153.07 |
| hypothetical protein | LV84_00141 | Not Available | Negative | 176971 - 177159 | 6564.39 |
| hypothetical protein | LV84_00142 | Not Available | Positive | 177414 - 178523 | 42832.4 |
| hypothetical protein | LV84_00143 | Not Available | Negative | 178952 - 179140 | 6564.39 |
| dna-binding beta-propeller fold protein ynce | LV84_00144 | Not Available | Positive | 179575 - 180627 | 38333.5 |
| rep element-mobilizing transposase rayt | LV84_00145 | Not Available | Negative | 181294 - 181755 | 18088.8 |
| putative gh43/duf377 family glycosyl hydrolase | LV84_00146 | Not Available | Negative | 183061 - 184092 | 38570.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
