Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus ratkowskyi |
| Strain | strain DSM 22686 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | saline lake cyanobacterial mats; sea ice |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1516046 bp
Thymine Count
1505068 bp
Guanine Count
980277 bp
Cytosine Count
983951 bp
Genome Length
4994706 bp
Protein-coding Genes
4263 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | LV84_01478 | Not Available | Negative | 1683097 - 1684107 | 37353.9 |
| peptidase m28-like protein | LV84_01479 | Not Available | Positive | 1684153 - 1685082 | 34356.4 |
| cic family chloride channel protein | LV84_01480 | Not Available | Positive | 1685199 - 1686926 | 62839.9 |
| monofunctional biosynthetic peptidoglycan transglycosylase | LV84_01481 | Not Available | Negative | 1687359 - 1688060 | 26870.1 |
| ubiquinone/menaquinone biosynthesis c-methylase ubie | LV84_01482 | Not Available | Negative | 1688070 - 1688864 | 29523.2 |
| acyl dehydratase | LV84_01483 | Not Available | Positive | 1689128 - 1689592 | 17531.1 |
| hypothetical protein | LV84_01484 | Not Available | Negative | 1689665 - 1689946 | 10250.2 |
| cubico group peptidase (beta-lactamase class c family) | LV84_01485 | Not Available | Negative | 1689943 - 1690983 | 39190.6 |
| outer membrane receptor protein involved in fe transport | LV84_01486 | Not Available | Negative | 1691056 - 1693488 | 90141.9 |
| fe-mn family superoxide dismutase | LV84_01487 | Not Available | Negative | 1693695 - 1694306 | 22395.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
