Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus ratkowskyi |
| Strain | strain DSM 22686 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | saline lake cyanobacterial mats; sea ice |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1516046 bp
Thymine Count
1505068 bp
Guanine Count
980277 bp
Cytosine Count
983951 bp
Genome Length
4994706 bp
Protein-coding Genes
4263 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| a/g-specific dna-adenine glycosylase | LV84_01468 | Not Available | Positive | 1668032 - 1669129 | 42376.8 |
| single-strand dna-binding protein | LV84_01469 | Not Available | Positive | 1669177 - 1669644 | 16949.8 |
| gliding motility-associated protein glde | LV84_01470 | Not Available | Positive | 1669715 - 1671064 | 50561.4 |
| glutamate synthase (nadph/nadh) large chain | LV84_01471 | Not Available | Positive | 1671459 - 1675949 | 165621.0 |
| glutamate synthase (nadph/nadh) small chain | LV84_01472 | Not Available | Positive | 1675951 - 1677429 | 53691.7 |
| nhaa family na+:h+ antiporter | LV84_01473 | Not Available | Negative | 1677665 - 1678990 | 47893.8 |
| uncharacterized protein duf4890 | LV84_01474 | Not Available | Negative | 1679614 - 1680036 | 16166.3 |
| nadh dehydrogenase | LV84_01475 | Not Available | Negative | 1680130 - 1681461 | 49971.2 |
| yebc/pmpr family dna-binding regulatory protein | LV84_01476 | Not Available | Positive | 1681596 - 1682303 | 27000.9 |
| inosine/xanthosine triphosphatase | LV84_01477 | Not Available | Positive | 1682329 - 1682895 | 20711.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
