Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus ratkowskyi |
| Strain | strain DSM 22686 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | saline lake cyanobacterial mats; sea ice |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1516046 bp
Thymine Count
1505068 bp
Guanine Count
980277 bp
Cytosine Count
983951 bp
Genome Length
4994706 bp
Protein-coding Genes
4263 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| zinc carboxypeptidase | LV84_01458 | Not Available | Positive | 1655837 - 1657636 | 68065.2 |
| lactoylglutathione lyase | LV84_01459 | Not Available | Positive | 1657655 - 1658041 | 14577.4 |
| atp-dependent dna helicase recq | LV84_01460 | Not Available | Negative | 1658169 - 1660283 | 79609.2 |
| hypothetical protein | LV84_01461 | Not Available | Negative | 1660730 - 1661323 | 22291.1 |
| hypothetical protein | LV84_01462 | Not Available | Negative | 1661386 - 1662648 | 47194.5 |
| ycei-like domain-containing protein | LV84_01463 | Not Available | Negative | 1662665 - 1663243 | 20864.2 |
| uncharacterized protein duf4221 | LV84_01464 | Not Available | Positive | 1663756 - 1664886 | 43445.0 |
| ribonuclease g | LV84_01465 | Not Available | Negative | 1665003 - 1666574 | 59074.3 |
| tetratricopeptide repeat protein | LV84_01466 | Not Available | Negative | 1666756 - 1667583 | 31004.7 |
| dna-binding protein hu-beta | LV84_01467 | Not Available | Negative | 1667602 - 1667910 | 11529.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
