Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus ratkowskyi |
| Strain | strain DSM 22686 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | saline lake cyanobacterial mats; sea ice |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1516046 bp
Thymine Count
1505068 bp
Guanine Count
980277 bp
Cytosine Count
983951 bp
Genome Length
4994706 bp
Protein-coding Genes
4263 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| excinuclease abc subunit a | LV84_01448 | Not Available | Positive | 1643551 - 1646367 | 105082.0 |
| nucleotidyltransferase substrate binding protein (tigr01987 family) | LV84_01449 | Not Available | Positive | 1646578 - 1646988 | 16176.3 |
| putative nucleotidyltransferase | LV84_01450 | Not Available | Positive | 1646978 - 1647301 | 12107.4 |
| hypothetical protein | LV84_01451 | Not Available | Positive | 1647345 - 1647941 | 23302.4 |
| hypothetical protein | LV84_01452 | Not Available | Positive | 1647973 - 1648668 | 26670.1 |
| rhodanese-like domain-containing protein | LV84_01453 | Not Available | Negative | 1648994 - 1649305 | 10796.8 |
| hydroxyacylglutathione hydrolase | LV84_01454 | Not Available | Negative | 1649317 - 1650711 | 51826.4 |
| zinc carboxypeptidase | LV84_01455 | Not Available | Positive | 1650989 - 1653568 | 95597.3 |
| starch phosphorylase | LV84_01456 | Not Available | Positive | 1653874 - 1655532 | 63727.2 |
| hypothetical protein | LV84_01457 | Not Available | Negative | 1655508 - 1655651 | 5366.43 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
