Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus ratkowskyi |
| Strain | strain DSM 22686 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | saline lake cyanobacterial mats; sea ice |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1516046 bp
Thymine Count
1505068 bp
Guanine Count
980277 bp
Cytosine Count
983951 bp
Genome Length
4994706 bp
Protein-coding Genes
4263 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pas domain s-box-containing protein | LV84_01438 | Not Available | Positive | 1632549 - 1633565 | 38707.4 |
| membrane-associated phospholipid phosphatase | LV84_01439 | Not Available | Negative | 1633711 - 1634298 | 21616.2 |
| beta-lactamase class a | LV84_01440 | Not Available | Negative | 1634348 - 1635259 | 33531.5 |
| s-formylglutathione hydrolase frmb | LV84_01441 | Not Available | Positive | 1635392 - 1636216 | 31190.8 |
| sugar phosphate isomerase/epimerase | LV84_01442 | Not Available | Positive | 1636307 - 1637206 | 34225.4 |
| peptidase m28-like protein | LV84_01443 | Not Available | Positive | 1637369 - 1638910 | 56536.0 |
| cubico group peptidase (beta-lactamase class c family) | LV84_01444 | Not Available | Positive | 1639290 - 1640375 | 41253.4 |
| arylsulfatase | LV84_01445 | Not Available | Negative | 1640531 - 1642057 | 57041.6 |
| nadr type nicotinamide-nucleotide adenylyltransferase | LV84_01446 | Not Available | Negative | 1642083 - 1642595 | 19963.9 |
| nicotinamide mononucleotide transporter | LV84_01447 | Not Available | Negative | 1642769 - 1643392 | 24106.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
