Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus ratkowskyi |
| Strain | strain DSM 22686 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | saline lake cyanobacterial mats; sea ice |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1516046 bp
Thymine Count
1505068 bp
Guanine Count
980277 bp
Cytosine Count
983951 bp
Genome Length
4994706 bp
Protein-coding Genes
4263 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pas domain-containing protein | LV84_01428 | Not Available | Positive | 1617655 - 1618902 | 46922.0 |
| response regulator receiver domain-containing protein | LV84_01429 | Not Available | Positive | 1618895 - 1619305 | 15708.0 |
| arabinan endo-1,5-alpha-l-arabinosidase | LV84_01430 | Not Available | Positive | 1619642 - 1620694 | 39016.9 |
| hypothetical protein | LV84_01431 | Not Available | Positive | 1620841 - 1620960 | 4390.55 |
| beta-xylosidase | LV84_01432 | Not Available | Positive | 1621411 - 1622958 | 57864.4 |
| glycosyl hydrolase family 2 | LV84_01433 | Not Available | Positive | 1623067 - 1624911 | 68953.9 |
| aldose 1-epimerase | LV84_01434 | Not Available | Positive | 1624917 - 1626065 | 42212.6 |
| two-component system cheb/cher fusion protein | LV84_01435 | Not Available | Positive | 1626676 - 1629762 | 118959.0 |
| pas domain s-box-containing protein | LV84_01436 | Not Available | Positive | 1629759 - 1632119 | 89948.5 |
| response regulator receiver domain-containing protein | LV84_01437 | Not Available | Positive | 1632109 - 1632549 | 16160.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
