Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus ratkowskyi |
| Strain | strain DSM 22686 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | saline lake cyanobacterial mats; sea ice |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1516046 bp
Thymine Count
1505068 bp
Guanine Count
980277 bp
Cytosine Count
983951 bp
Genome Length
4994706 bp
Protein-coding Genes
4263 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-binding cassette subfamily b protein | LV84_01418 | Not Available | Negative | 1604669 - 1606867 | 83367.3 |
| transposase-like zinc ribbon protein | LV84_01419 | Not Available | Positive | 1606950 - 1607224 | 10434.5 |
| two component regulator with propeller domain | LV84_01420 | Not Available | Positive | 1607377 - 1608813 | 53840.3 |
| hypothetical protein | LV84_01421 | Not Available | Negative | 1608852 - 1609055 | 7851.74 |
| bnr repeat protein | LV84_01422 | Not Available | Positive | 1609106 - 1610395 | 48614.9 |
| glutamate dehydrogenase (nadp+) | LV84_01423 | Not Available | Negative | 1611306 - 1612649 | 49143.2 |
| zn-dependent m28 family amino/carboxypeptidase | LV84_01424 | Not Available | Positive | 1613099 - 1614739 | 60700.5 |
| circadian clock protein kaic | LV84_01425 | Not Available | Positive | 1615436 - 1616863 | 52746.6 |
| circadian clock protein kaib | LV84_01426 | Not Available | Positive | 1617037 - 1617330 | 11004.6 |
| circadian clock protein kaib | LV84_01427 | Not Available | Positive | 1617341 - 1617652 | 11604.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
