Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus ratkowskyi |
| Strain | strain DSM 22686 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | saline lake cyanobacterial mats; sea ice |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1516046 bp
Thymine Count
1505068 bp
Guanine Count
980277 bp
Cytosine Count
983951 bp
Genome Length
4994706 bp
Protein-coding Genes
4263 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type iv secretory system conjugative dna transfer vird4/trag family protein | LV84_01408 | Not Available | Negative | 1594540 - 1596516 | 75233.7 |
| relaxase/mobilization nuclease-like protein | LV84_01409 | Not Available | Negative | 1596526 - 1597743 | 46098.6 |
| mobilization protein mobc | LV84_01410 | Not Available | Negative | 1597744 - 1598130 | 15273.0 |
| hypothetical protein | LV84_01411 | Not Available | Negative | 1598127 - 1598258 | 4796.86 |
| hypothetical protein | LV84_01412 | Not Available | Negative | 1598321 - 1598536 | 8368.68 |
| transposase-like protein | LV84_01413 | Not Available | Negative | 1598839 - 1600077 | 47494.1 |
| alpha 1,4-glycosyltransferase | LV84_01414 | Not Available | Negative | 1600360 - 1601082 | 28289.9 |
| galactosyltransferase-like protein | LV84_01415 | Not Available | Negative | 1601464 - 1602237 | 30463.8 |
| lanthionine synthetase-like protein | LV84_01416 | Not Available | Negative | 1602242 - 1603336 | 41198.9 |
| multidrug resistance efflux pump | LV84_01417 | Not Available | Negative | 1603362 - 1604666 | 49249.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
