Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus ratkowskyi |
| Strain | strain DSM 22686 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | saline lake cyanobacterial mats; sea ice |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1516046 bp
Thymine Count
1505068 bp
Guanine Count
980277 bp
Cytosine Count
983951 bp
Genome Length
4994706 bp
Protein-coding Genes
4263 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| conjugative transposon traj protein | LV84_01368 | Not Available | Negative | 1551943 - 1552926 | 35815.6 |
| hypothetical protein | LV84_01369 | Not Available | Negative | 1552923 - 1553570 | 24407.1 |
| hypothetical protein | LV84_01370 | Not Available | Negative | 1553560 - 1554234 | 25905.3 |
| hypothetical protein | LV84_01371 | Not Available | Negative | 1554218 - 1554910 | 26624.6 |
| conjugation system trag family atpase | LV84_01372 | Not Available | Negative | 1554907 - 1557348 | 93654.0 |
| uncharacterized protein duf4133 | LV84_01373 | Not Available | Negative | 1557351 - 1557629 | 10299.2 |
| uncharacterized protein duf4134 | LV84_01374 | Not Available | Negative | 1557790 - 1558092 | 10568.0 |
| hypothetical protein | LV84_01375 | Not Available | Negative | 1558121 - 1558537 | 15611.1 |
| rtec protein | LV84_01376 | Not Available | Negative | 1558621 - 1559454 | 32313.6 |
| lyttr family transcriptional regulator | LV84_01377 | Not Available | Positive | 1559949 - 1560674 | 28884.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
