Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus ratkowskyi |
| Strain | strain DSM 22686 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | saline lake cyanobacterial mats; sea ice |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1516046 bp
Thymine Count
1505068 bp
Guanine Count
980277 bp
Cytosine Count
983951 bp
Genome Length
4994706 bp
Protein-coding Genes
4263 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | LV84_01358 | Not Available | Negative | 1540398 - 1543733 | 123848.0 |
| hypothetical protein | LV84_01359 | Not Available | Negative | 1543741 - 1545156 | 52965.8 |
| dna repair protein radc | LV84_01360 | Not Available | Negative | 1545871 - 1546341 | 17061.6 |
| hypothetical protein | LV84_01361 | Not Available | Negative | 1546379 - 1546516 | 4885.94 |
| phage/plasmid-like protein (tigr03299 family) | LV84_01362 | Not Available | Negative | 1546657 - 1547727 | 38927.2 |
| hypothetical protein | LV84_01363 | Not Available | Negative | 1548188 - 1548916 | 27967.3 |
| conjugative transposon tran protein | LV84_01364 | Not Available | Negative | 1548924 - 1549760 | 31090.8 |
| conjugative transposon tram protein | LV84_01365 | Not Available | Negative | 1549786 - 1551045 | 46456.0 |
| hypothetical protein | LV84_01366 | Not Available | Negative | 1551029 - 1551322 | 11029.6 |
| conjugative transposon trak protein | LV84_01367 | Not Available | Negative | 1551319 - 1551936 | 23684.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
