Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus ratkowskyi |
| Strain | strain DSM 22686 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | saline lake cyanobacterial mats; sea ice |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1516046 bp
Thymine Count
1505068 bp
Guanine Count
980277 bp
Cytosine Count
983951 bp
Genome Length
4994706 bp
Protein-coding Genes
4263 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative outer membrane starch-binding protein | LV84_01338 | Not Available | Negative | 1514895 - 1516673 | 68110.9 |
| tonb-linked susc/raga family outer membrane protein | LV84_01339 | Not Available | Negative | 1516687 - 1520169 | 128104.0 |
| fecr family protein | LV84_01340 | Not Available | Negative | 1520251 - 1521285 | 38837.9 |
| rna polymerase sigma-70 factor (ecf subfamily) | LV84_01341 | Not Available | Negative | 1521510 - 1522103 | 22865.7 |
| xaa-pro aminopeptidase | LV84_01342 | Not Available | Negative | 1522237 - 1523565 | 50620.5 |
| putative zn-dependent peptidase | LV84_01343 | Not Available | Positive | 1523786 - 1525015 | 46957.4 |
| putative o-methyltransferase yrrm | LV84_01344 | Not Available | Positive | 1525020 - 1525664 | 24089.4 |
| membrane-bound lytic murein transglycosylase d | LV84_01345 | Not Available | Positive | 1525730 - 1527319 | 59192.6 |
| protein of unknown function (duf3078) | LV84_01346 | Not Available | Positive | 1527344 - 1528336 | 37080.2 |
| hypothetical protein | LV84_01347 | Not Available | Negative | 1528333 - 1528725 | 15093.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
