Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus ratkowskyi |
| Strain | strain DSM 22686 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | saline lake cyanobacterial mats; sea ice |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1516046 bp
Thymine Count
1505068 bp
Guanine Count
980277 bp
Cytosine Count
983951 bp
Genome Length
4994706 bp
Protein-coding Genes
4263 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | LV84_01328 | Not Available | Positive | 1500188 - 1501309 | 42633.0 |
| serine/threonine-protein kinase hipa | LV84_01329 | Not Available | Negative | 1501352 - 1502653 | 48477.0 |
| helix-turn-helix protein | LV84_01330 | Not Available | Negative | 1502647 - 1502982 | 12951.8 |
| superfamily i dna and/or rna helicase | LV84_01331 | Not Available | Negative | 1503126 - 1507001 | 146757.0 |
| short-subunit dehydrogenase | LV84_01332 | Not Available | Negative | 1507002 - 1507823 | 30091.5 |
| rep element-mobilizing transposase rayt | LV84_01333 | Not Available | Negative | 1508966 - 1509439 | 18679.5 |
| uncharacterized protein duf4221 | LV84_01334 | Not Available | Negative | 1509474 - 1510643 | 45296.6 |
| 23s rrna (uracil1939-c5)-methyltransferase | LV84_01335 | Not Available | Positive | 1510757 - 1512163 | 53343.0 |
| hypothetical protein | LV84_01336 | Not Available | Positive | 1512160 - 1512537 | 14653.4 |
| arylsulfatase a-like enzyme | LV84_01337 | Not Available | Negative | 1512678 - 1514726 | 76122.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
