Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus ratkowskyi |
| Strain | strain DSM 22686 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | saline lake cyanobacterial mats; sea ice |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1516046 bp
Thymine Count
1505068 bp
Guanine Count
980277 bp
Cytosine Count
983951 bp
Genome Length
4994706 bp
Protein-coding Genes
4263 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding transcriptional lysr family regulator | LV84_01318 | Not Available | Negative | 1486119 - 1486988 | 32854.0 |
| histidine ammonia-lyase | LV84_01319 | Not Available | Positive | 1487087 - 1488652 | 56377.6 |
| imidazolonepropionase | LV84_01320 | Not Available | Positive | 1488775 - 1490013 | 44556.5 |
| urocanate hydratase | LV84_01321 | Not Available | Positive | 1490144 - 1492147 | 74497.7 |
| uma2 family endonuclease | LV84_01322 | Not Available | Negative | 1492259 - 1492873 | 23380.6 |
| formiminoglutamase | LV84_01323 | Not Available | Positive | 1493106 - 1494062 | 35429.1 |
| secreted protein | LV84_01324 | Not Available | Positive | 1494516 - 1495253 | 26294.6 |
| ferritin-like protein | LV84_01325 | Not Available | Positive | 1495270 - 1496076 | 29123.8 |
| fad/fmn-containing dehydrogenase | LV84_01326 | Not Available | Negative | 1496152 - 1499094 | 108316.0 |
| uncharacterized sam-binding protein ycdf (duf218 family) | LV84_01327 | Not Available | Positive | 1499280 - 1500050 | 29624.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
