Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus ratkowskyi |
| Strain | strain DSM 22686 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | saline lake cyanobacterial mats; sea ice |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1516046 bp
Thymine Count
1505068 bp
Guanine Count
980277 bp
Cytosine Count
983951 bp
Genome Length
4994706 bp
Protein-coding Genes
4263 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| adenosylhomocysteinase | LV84_01298 | Not Available | Negative | 1467381 - 1468700 | 48119.8 |
| bira family biotin operon repressor/biotin-[acetyl-coa-carboxylase] ligase | LV84_01299 | Not Available | Negative | 1468784 - 1469542 | 28625.3 |
| ribosome-associated protein | LV84_01300 | Not Available | Positive | 1469607 - 1469954 | 13103.6 |
| cell division protease ftsh | LV84_01301 | Not Available | Positive | 1470020 - 1472092 | 76494.6 |
| udp-2,3-diacylglucosamine hydrolase | LV84_01302 | Not Available | Positive | 1472156 - 1472932 | 29554.2 |
| hypothetical protein | LV84_01303 | Not Available | Positive | 1472929 - 1473759 | 31526.2 |
| peptide-methionine (s)-s-oxide reductase | LV84_01304 | Not Available | Positive | 1473756 - 1474307 | 20479.5 |
| peptidylprolyl isomerase | LV84_01305 | Not Available | Negative | 1474974 - 1475399 | 15058.0 |
| dna-binding ntrc family response regulator | LV84_01306 | Not Available | Positive | 1475582 - 1476964 | 52155.1 |
| histidine kinase/dna gyrase b/hsp90-like atpase | LV84_01307 | Not Available | Positive | 1476954 - 1478297 | 50316.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
