Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus ratkowskyi |
| Strain | strain DSM 22686 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | saline lake cyanobacterial mats; sea ice |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1516046 bp
Thymine Count
1505068 bp
Guanine Count
980277 bp
Cytosine Count
983951 bp
Genome Length
4994706 bp
Protein-coding Genes
4263 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | LV84_00117 | Not Available | Positive | 138054 - 139319 | 48158.6 |
| glycerophosphoryl diester phosphodiesterase | LV84_00118 | Not Available | Positive | 139714 - 140496 | 29384.1 |
| uncharacterized protein duf1801 | LV84_00119 | Not Available | Positive | 140503 - 140895 | 15148.1 |
| dipeptidyl aminopeptidase/acylaminoacyl peptidase | LV84_00120 | Not Available | Negative | 140992 - 143178 | 81404.2 |
| nitrilase | LV84_00121 | Not Available | Positive | 143737 - 144690 | 35468.5 |
| 4-hydroxybenzoate polyprenyltransferase | LV84_00122 | Not Available | Positive | 145167 - 146039 | 33062.8 |
| glutamate 5-kinase | LV84_00123 | Not Available | Positive | 146592 - 147674 | 39934.4 |
| glutamate-5-semialdehyde dehydrogenase | LV84_00124 | Not Available | Positive | 147667 - 148908 | 45256.2 |
| agmatine deiminase | LV84_00125 | Not Available | Negative | 149397 - 150470 | 40318.8 |
| n-carbamoylputrescine amidase | LV84_00126 | Not Available | Negative | 150474 - 151349 | 32555.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
