Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus ratkowskyi |
| Strain | strain DSM 22686 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | saline lake cyanobacterial mats; sea ice |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1516046 bp
Thymine Count
1505068 bp
Guanine Count
980277 bp
Cytosine Count
983951 bp
Genome Length
4994706 bp
Protein-coding Genes
4263 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized protein duf4837 | LV84_01268 | Not Available | Positive | 1428066 - 1429163 | 41027.8 |
| malate dehydrogenase (oxaloacetate-decarboxylating)(nadp+) | LV84_01269 | Not Available | Positive | 1429184 - 1431454 | 82560.8 |
| holliday junction dna helicase subunit ruva | LV84_01270 | Not Available | Positive | 1431451 - 1432047 | 21548.4 |
| cell surface protein spra | LV84_01271 | Not Available | Positive | 1432060 - 1439190 | 269059.0 |
| glycine cleavage system h protein | LV84_01272 | Not Available | Positive | 1439247 - 1439624 | 13813.2 |
| vanz like protein | LV84_01273 | Not Available | Positive | 1439683 - 1440003 | 11700.5 |
| outer membrane transport energization protein tonb | LV84_01274 | Not Available | Positive | 1440074 - 1440751 | 24720.8 |
| protein tonb | LV84_01275 | Not Available | Positive | 1440908 - 1441351 | 16562.1 |
| protein tonb | LV84_01276 | Not Available | Positive | 1441370 - 1441579 | 7648.44 |
| uncharacterized protein (tigr00255 family) | LV84_01277 | Not Available | Negative | 1441775 - 1442656 | 33904.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
