Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus ratkowskyi |
| Strain | strain DSM 22686 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | saline lake cyanobacterial mats; sea ice |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1516046 bp
Thymine Count
1505068 bp
Guanine Count
980277 bp
Cytosine Count
983951 bp
Genome Length
4994706 bp
Protein-coding Genes
4263 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | LV84_01258 | Not Available | Positive | 1418281 - 1418466 | 7251.97 |
| enoyl-coa hydratase | LV84_01259 | Not Available | Positive | 1418442 - 1419227 | 28155.1 |
| o-antigen/teichoic acid export membrane protein | LV84_01260 | Not Available | Positive | 1419243 - 1420748 | 56857.0 |
| hypothetical protein | LV84_01261 | Not Available | Positive | 1420878 - 1421015 | 5051.0 |
| tetratricopeptide repeat protein | LV84_01262 | Not Available | Positive | 1421032 - 1422795 | 66821.5 |
| uncharacterized protein duf4292 | LV84_01263 | Not Available | Positive | 1422788 - 1423528 | 28042.9 |
| septal ring factor envc (amia/amib activator) | LV84_01264 | Not Available | Positive | 1423534 - 1424781 | 46658.2 |
| sec-independent protein translocase protein tata | LV84_01265 | Not Available | Positive | 1424893 - 1425093 | 7256.08 |
| aspartyl/glutamyl-trna(asn/gln) amidotransferase subunit a | LV84_01266 | Not Available | Positive | 1425112 - 1426539 | 52321.2 |
| membrane-bound lytic murein transglycosylase d | LV84_01267 | Not Available | Positive | 1426551 - 1427942 | 52731.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
