Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus ratkowskyi |
| Strain | strain DSM 22686 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | saline lake cyanobacterial mats; sea ice |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1516046 bp
Thymine Count
1505068 bp
Guanine Count
980277 bp
Cytosine Count
983951 bp
Genome Length
4994706 bp
Protein-coding Genes
4263 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alginate lyase | LV84_01248 | Not Available | Positive | 1406040 - 1407212 | 44595.3 |
| hypothetical protein | LV84_01249 | Not Available | Positive | 1407388 - 1408968 | 58349.5 |
| hypothetical protein | LV84_01250 | Not Available | Negative | 1408998 - 1409705 | 26261.4 |
| site-specific recombinase | LV84_01251 | Not Available | Negative | 1409877 - 1411949 | 77980.9 |
| hypothetical protein | LV84_01252 | Not Available | Positive | 1412522 - 1412818 | 11252.8 |
| putative membrane protein | LV84_01253 | Not Available | Negative | 1412953 - 1414092 | 40172.5 |
| degt/dnrj/eryc1/strs aminotransferase family protein | LV84_01254 | Not Available | Negative | 1414101 - 1414808 | 26601.0 |
| degt/dnrj/eryc1/strs aminotransferase family protein | LV84_01255 | Not Available | Negative | 1414847 - 1415185 | 12116.0 |
| glycosyltransferase involved in cell wall biosynthesis | LV84_01256 | Not Available | Negative | 1415166 - 1416455 | 49034.9 |
| isocitrate dehydrogenase | LV84_01257 | Not Available | Negative | 1416777 - 1418228 | 53136.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
