Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus ratkowskyi |
| Strain | strain DSM 22686 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | saline lake cyanobacterial mats; sea ice |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1516046 bp
Thymine Count
1505068 bp
Guanine Count
980277 bp
Cytosine Count
983951 bp
Genome Length
4994706 bp
Protein-coding Genes
4263 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sugar phosphate isomerase/epimerase | LV84_01238 | Not Available | Positive | 1398873 - 1399925 | 39281.4 |
| cytochrome c | LV84_01239 | Not Available | Positive | 1399951 - 1400367 | 14850.2 |
| uncharacterized protein duf1080 | LV84_01240 | Not Available | Positive | 1400372 - 1401106 | 27422.0 |
| Trna-lys | Not Available | Not Available | Positive | 1401821 - 1401893 | Not Available |
| Trna-arg | Not Available | Not Available | Positive | 1402009 - 1402085 | Not Available |
| Trna-pro | Not Available | Not Available | Positive | 1402133 - 1402206 | Not Available |
| Trna-lys | Not Available | Not Available | Positive | 1402271 - 1402346 | Not Available |
| hypothetical protein | LV84_01245 | Not Available | Positive | 1402581 - 1403306 | 27494.5 |
| selenocysteine lyase/cysteine desulfurase | LV84_01246 | Not Available | Negative | 1403629 - 1405020 | 51418.8 |
| uncharacterized protein (duf302 family) | LV84_01247 | Not Available | Negative | 1405233 - 1405622 | 14128.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
