Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus ratkowskyi |
| Strain | strain DSM 22686 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | saline lake cyanobacterial mats; sea ice |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1516046 bp
Thymine Count
1505068 bp
Guanine Count
980277 bp
Cytosine Count
983951 bp
Genome Length
4994706 bp
Protein-coding Genes
4263 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type i phosphodiesterase/nucleotide pyrophosphatase | LV84_01228 | Not Available | Positive | 1387488 - 1389122 | 60513.6 |
| homogentisate 1,2-dioxygenase | LV84_01229 | Not Available | Negative | 1389313 - 1390476 | 44631.0 |
| uncharacterized protein yjbj (upf0337 family) | LV84_01230 | Not Available | Negative | 1390900 - 1391088 | 7143.49 |
| beta-glucanase (gh16 family) | LV84_01231 | Not Available | Positive | 1391159 - 1391947 | 29693.7 |
| chemoreceptor-like protein with four helix bundle sensory module | LV84_01232 | Not Available | Positive | 1392078 - 1392719 | 24868.9 |
| gluconate 2-dehydrogenase subunit 3-like protein | LV84_01233 | Not Available | Negative | 1393024 - 1393581 | 20004.8 |
| choline dehydrogenase-like flavoprotein | LV84_01234 | Not Available | Negative | 1393599 - 1395278 | 62547.0 |
| hydroxypyruvate isomerase | LV84_01235 | Not Available | Negative | 1395305 - 1396183 | 32866.5 |
| nucleoside transporter | LV84_01236 | Not Available | Negative | 1396191 - 1397417 | 45342.4 |
| putative dehydrogenase | LV84_01237 | Not Available | Positive | 1397671 - 1398840 | 43141.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
