Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus ratkowskyi |
| Strain | strain DSM 22686 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | saline lake cyanobacterial mats; sea ice |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1516046 bp
Thymine Count
1505068 bp
Guanine Count
980277 bp
Cytosine Count
983951 bp
Genome Length
4994706 bp
Protein-coding Genes
4263 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2fe-2s ferredoxin | LV84_01208 | Not Available | Negative | 1367305 - 1367625 | 11709.8 |
| thioredoxin reductase (nadph) | LV84_01209 | Not Available | Negative | 1367641 - 1368645 | 36575.2 |
| dna-binding marr family transcriptional regulator | LV84_01210 | Not Available | Negative | 1368702 - 1369151 | 17547.7 |
| putative atpase | LV84_01211 | Not Available | Negative | 1369301 - 1370563 | 46674.5 |
| hypothetical protein | LV84_01212 | Not Available | Negative | 1370926 - 1371105 | 6838.39 |
| l-threonine aldolase | LV84_01213 | Not Available | Negative | 1371326 - 1372345 | 36837.3 |
| glycerophosphoryl diester phosphodiesterase | LV84_01214 | Not Available | Negative | 1372342 - 1373301 | 35314.4 |
| uncharacterized protein duf2721 | LV84_01215 | Not Available | Negative | 1373291 - 1373749 | 17501.0 |
| anti-sigma-k factor rska | LV84_01216 | Not Available | Negative | 1373844 - 1374668 | 30381.3 |
| rna polymerase sigma-70 factor (ecf subfamily) | LV84_01217 | Not Available | Negative | 1374668 - 1375201 | 20465.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
