Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus ratkowskyi |
| Strain | strain DSM 22686 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | saline lake cyanobacterial mats; sea ice |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1516046 bp
Thymine Count
1505068 bp
Guanine Count
980277 bp
Cytosine Count
983951 bp
Genome Length
4994706 bp
Protein-coding Genes
4263 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | LV84_01188 | Not Available | Negative | 1341425 - 1341574 | 5887.24 |
| mechanosensitive ion channel-like protein | LV84_01189 | Not Available | Positive | 1341615 - 1344167 | 96876.6 |
| cspa family cold shock protein | LV84_01190 | Not Available | Negative | 1344209 - 1344400 | 6879.99 |
| phosphohistidine phosphatase | LV84_01191 | Not Available | Positive | 1344488 - 1344979 | 18554.2 |
| benzil reductase ((s)-benzoin forming) | LV84_01192 | Not Available | Negative | 1345194 - 1345928 | 27187.7 |
| atp-dependent hsluv protease atp-binding subunit hslu | LV84_01193 | Not Available | Negative | 1345952 - 1347349 | 52067.1 |
| atp-dependent lon protease | LV84_01194 | Not Available | Negative | 1347458 - 1349902 | 91191.6 |
| regulator of sigma e protease | LV84_01195 | Not Available | Negative | 1350073 - 1351398 | 48206.7 |
| 1-deoxy-d-xylulose 5-phosphate reductoisomerase | LV84_01196 | Not Available | Negative | 1351398 - 1352564 | 42835.9 |
| do/deqq family serine protease | LV84_01197 | Not Available | Positive | 1353128 - 1354579 | 52043.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
