Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus ratkowskyi |
| Strain | strain DSM 22686 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | saline lake cyanobacterial mats; sea ice |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1516046 bp
Thymine Count
1505068 bp
Guanine Count
980277 bp
Cytosine Count
983951 bp
Genome Length
4994706 bp
Protein-coding Genes
4263 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| crp/fnr family transcriptional regulator | LV84_01178 | Not Available | Positive | 1326669 - 1327355 | 26468.5 |
| putative atp-grasp superfamily atp-dependent carboligase | LV84_01179 | Not Available | Positive | 1328159 - 1329259 | 41921.0 |
| doxx protein | LV84_01180 | Not Available | Positive | 1329835 - 1330554 | 27548.0 |
| nhap-type na+/h+ or k+/h+ antiporter | LV84_01181 | Not Available | Negative | 1330818 - 1332038 | 44997.2 |
| hypothetical protein | LV84_01182 | Not Available | Positive | 1332257 - 1332412 | 5942.25 |
| putative dehydrogenase | LV84_01183 | Not Available | Positive | 1332681 - 1334006 | 49354.0 |
| hypothetical protein | LV84_01184 | Not Available | Positive | 1334613 - 1336022 | 52284.5 |
| sulp family sulfate permease | LV84_01185 | Not Available | Positive | 1336599 - 1338122 | 54313.9 |
| cubico group peptidase (beta-lactamase class c family) | LV84_01186 | Not Available | Negative | 1338347 - 1339639 | 47480.9 |
| do/deqq family serine protease | LV84_01187 | Not Available | Negative | 1339767 - 1341272 | 53394.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
