Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus ratkowskyi |
| Strain | strain DSM 22686 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | saline lake cyanobacterial mats; sea ice |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1516046 bp
Thymine Count
1505068 bp
Guanine Count
980277 bp
Cytosine Count
983951 bp
Genome Length
4994706 bp
Protein-coding Genes
4263 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | LV84_01148 | Not Available | Negative | 1280362 - 1280814 | 17627.7 |
| transposase-like zinc ribbon protein | LV84_01149 | Not Available | Negative | 1281202 - 1281485 | 10820.0 |
| tetr family transcriptional regulator | LV84_01150 | Not Available | Positive | 1282047 - 1282712 | 26143.8 |
| arylsulfatase a-like enzyme | LV84_01151 | Not Available | Positive | 1282702 - 1284186 | 55639.9 |
| putative outer membrane starch-binding protein | LV84_01152 | Not Available | Negative | 1284273 - 1285829 | 57489.2 |
| tonb-linked susc/raga family outer membrane protein | LV84_01153 | Not Available | Negative | 1285859 - 1289050 | 117066.0 |
| alkaline phosphatase | LV84_01154 | Not Available | Negative | 1290489 - 1291001 | 18715.2 |
| alkaline phosphatase | LV84_01155 | Not Available | Negative | 1290995 - 1292326 | 49512.5 |
| calcium-dependent phosphoinositide phospholipase c | LV84_01156 | Not Available | Positive | 1292539 - 1293639 | 40845.6 |
| susd-like starch-binding protein associating with outer membrane | LV84_01157 | Not Available | Negative | 1293903 - 1295681 | 66056.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
