Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus ratkowskyi |
| Strain | strain DSM 22686 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | saline lake cyanobacterial mats; sea ice |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1516046 bp
Thymine Count
1505068 bp
Guanine Count
980277 bp
Cytosine Count
983951 bp
Genome Length
4994706 bp
Protein-coding Genes
4263 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methionine synthase (b12-independent) | LV84_01127 | Not Available | Negative | 1257685 - 1260012 | 88460.3 |
| putative membrane protein | LV84_01129 | Not Available | Positive | 1260649 - 1261014 | 13371.9 |
| magnesium chelatase subunit i | LV84_01130 | Not Available | Negative | 1261085 - 1262608 | 57372.6 |
| von willebrand factor type a domain-containing protein | LV84_01131 | Not Available | Negative | 1262614 - 1263714 | 41588.8 |
| putative nucleic acid-binding protein | LV84_01132 | Not Available | Negative | 1263912 - 1264325 | 15620.9 |
| hypothetical protein | LV84_01133 | Not Available | Negative | 1264318 - 1264575 | 9867.06 |
| epoxyqueuosine reductase | LV84_01134 | Not Available | Positive | 1264780 - 1265715 | 35271.9 |
| magnesium transporter | LV84_01135 | Not Available | Positive | 1265731 - 1266843 | 42959.7 |
| heat shock protein hslj | LV84_01136 | Not Available | Negative | 1266847 - 1267260 | 15154.2 |
| nicotinate-nucleotide pyrophosphorylase | LV84_01137 | Not Available | Negative | 1267324 - 1268181 | 31294.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
