Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus ratkowskyi |
| Strain | strain DSM 22686 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | saline lake cyanobacterial mats; sea ice |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1516046 bp
Thymine Count
1505068 bp
Guanine Count
980277 bp
Cytosine Count
983951 bp
Genome Length
4994706 bp
Protein-coding Genes
4263 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphosulfolactate synthase | LV84_01117 | Not Available | Negative | 1246231 - 1247001 | 28741.6 |
| tetratricopeptide repeat protein | LV84_01118 | Not Available | Negative | 1247018 - 1248433 | 54809.4 |
| nucleoside-diphosphate-sugar epimerase | LV84_01119 | Not Available | Negative | 1248578 - 1249531 | 35591.3 |
| tyrosine-protein phosphatase ywqe | LV84_01120 | Not Available | Negative | 1249548 - 1250294 | 28883.2 |
| dtdp-4-dehydrorhamnose 3,5-epimerase | LV84_01121 | Not Available | Negative | 1250294 - 1250845 | 21060.7 |
| gtp-binding protein hflx | LV84_01122 | Not Available | Positive | 1251047 - 1252297 | 47656.5 |
| pas domain s-box-containing protein | LV84_01123 | Not Available | Positive | 1252431 - 1253498 | 40579.8 |
| cytochrome c | LV84_01124 | Not Available | Positive | 1253620 - 1255287 | 61693.0 |
| peptidase m1-like protein | LV84_01125 | Not Available | Negative | 1255306 - 1256958 | 63534.1 |
| hypothetical protein | LV84_01126 | Not Available | Positive | 1257210 - 1257545 | 12442.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
