Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus ratkowskyi |
| Strain | strain DSM 22686 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | saline lake cyanobacterial mats; sea ice |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1516046 bp
Thymine Count
1505068 bp
Guanine Count
980277 bp
Cytosine Count
983951 bp
Genome Length
4994706 bp
Protein-coding Genes
4263 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| anhydro-n-acetylmuramic acid kinase | LV84_01107 | Not Available | Positive | 1236401 - 1237474 | 38762.4 |
| glutamate dehydrogenase/leucine dehydrogenase | LV84_01108 | Not Available | Positive | 1237546 - 1238772 | 45073.9 |
| na+/h+ antiporter nhad/arsenite permease-like protein | LV84_01109 | Not Available | Positive | 1238954 - 1240480 | 56230.1 |
| dna-3-methyladenine glycosylase i | LV84_01110 | Not Available | Negative | 1240477 - 1241064 | 22520.9 |
| alanine racemase | LV84_01111 | Not Available | Positive | 1241152 - 1242306 | 42794.1 |
| formyltetrahydrofolate deformylase | LV84_01112 | Not Available | Negative | 1242303 - 1243157 | 32787.8 |
| hypothetical protein | LV84_01113 | Not Available | Negative | 1243269 - 1243682 | 15842.3 |
| hypothetical protein | LV84_01114 | Not Available | Negative | 1243663 - 1243884 | 8282.26 |
| shikimate dehydrogenase | LV84_01115 | Not Available | Negative | 1244397 - 1245134 | 27256.2 |
| putative membrane protein | LV84_01116 | Not Available | Negative | 1245237 - 1246124 | 32459.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
