Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus ratkowskyi |
| Strain | strain DSM 22686 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | saline lake cyanobacterial mats; sea ice |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1516046 bp
Thymine Count
1505068 bp
Guanine Count
980277 bp
Cytosine Count
983951 bp
Genome Length
4994706 bp
Protein-coding Genes
4263 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 16s rrna (cytidine1402-2'-o)-methyltransferase | LV84_01097 | Not Available | Negative | 1227212 - 1227904 | 25481.9 |
| 4a-hydroxytetrahydrobiopterin dehydratase | LV84_01098 | Not Available | Negative | 1227901 - 1228134 | 8928.58 |
| hypothetical protein | LV84_01099 | Not Available | Negative | 1228147 - 1228416 | 10036.0 |
| peptidyl-prolyl cis-trans isomerase d | LV84_01100 | Not Available | Negative | 1228505 - 1230616 | 77281.6 |
| cbs domain containing-hemolysin-like protein | LV84_01101 | Not Available | Negative | 1230701 - 1231984 | 48589.0 |
| hypothetical protein | LV84_01102 | Not Available | Negative | 1231987 - 1232196 | 7862.08 |
| lps export abc transporter protein lptc | LV84_01103 | Not Available | Negative | 1232271 - 1232816 | 20338.1 |
| hypothetical protein | LV84_01104 | Not Available | Negative | 1232901 - 1234202 | 48268.9 |
| hypothetical protein | LV84_01105 | Not Available | Negative | 1234307 - 1235590 | 46307.9 |
| type iii pantothenate kinase | LV84_01106 | Not Available | Negative | 1235580 - 1236296 | 26271.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
