Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus ratkowskyi |
| Strain | strain DSM 22686 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | saline lake cyanobacterial mats; sea ice |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1516046 bp
Thymine Count
1505068 bp
Guanine Count
980277 bp
Cytosine Count
983951 bp
Genome Length
4994706 bp
Protein-coding Genes
4263 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | LV84_01087 | Not Available | Positive | 1216732 - 1217994 | 48181.3 |
| hypothetical protein | LV84_01088 | Not Available | Positive | 1218366 - 1219832 | 53721.2 |
| subtilase family protein | LV84_01089 | Not Available | Positive | 1220161 - 1221816 | 59778.8 |
| ribose 5-phosphate isomerase b | LV84_01090 | Not Available | Negative | 1221923 - 1222360 | 15725.6 |
| sec-independent protein translocase protein tatc | LV84_01091 | Not Available | Negative | 1222491 - 1223345 | 31967.6 |
| glycine hydroxymethyltransferase | LV84_01092 | Not Available | Negative | 1223362 - 1224630 | 46678.1 |
| hypothetical protein | LV84_01093 | Not Available | Positive | 1224778 - 1225152 | 14609.2 |
| hypothetical protein | LV84_01094 | Not Available | Negative | 1225149 - 1225376 | 9012.95 |
| hypothetical protein | LV84_01095 | Not Available | Positive | 1225481 - 1226389 | 33377.3 |
| myo-inositol-1(or 4)-monophosphatase | LV84_01096 | Not Available | Negative | 1226390 - 1227193 | 29673.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
