Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus ratkowskyi |
| Strain | strain DSM 22686 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | saline lake cyanobacterial mats; sea ice |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1516046 bp
Thymine Count
1505068 bp
Guanine Count
980277 bp
Cytosine Count
983951 bp
Genome Length
4994706 bp
Protein-coding Genes
4263 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| murein l,d-transpeptidase ycbb/ykud | LV84_00097 | Not Available | Negative | 118525 - 120165 | 62994.5 |
| 2-dehydro-3-deoxyphosphooctonate aldolase (kdo 8-p synthase) | LV84_00098 | Not Available | Negative | 120175 - 121026 | 31015.3 |
| 3-deoxy-d-manno-octulosonate 8-phosphate phosphatase (kdo 8-p phosphatase) | LV84_00099 | Not Available | Negative | 121013 - 121597 | 22000.5 |
| putative amidohydrolase | LV84_00100 | Not Available | Negative | 121579 - 123120 | 58946.0 |
| mechanosensitive ion channel-like protein | LV84_00101 | Not Available | Positive | 123283 - 124185 | 33426.6 |
| outer membrane protein with beta-barrel domain | LV84_00102 | Not Available | Positive | 124238 - 125161 | 36064.7 |
| acetyltransferase (gnat) family protein | LV84_00103 | Not Available | Negative | 125182 - 125652 | 17370.3 |
| enamine deaminase rida (yjgf/yer057c/uk114 family) | LV84_00104 | Not Available | Positive | 125730 - 126242 | 18333.5 |
| hypothetical protein | LV84_00105 | Not Available | Negative | 126275 - 126757 | 17690.1 |
| dna-binding transcriptional regulator yhcf (gntr family) | LV84_00106 | Not Available | Negative | 127060 - 127443 | 14721.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
