Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus ratkowskyi |
| Strain | strain DSM 22686 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | saline lake cyanobacterial mats; sea ice |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1516046 bp
Thymine Count
1505068 bp
Guanine Count
980277 bp
Cytosine Count
983951 bp
Genome Length
4994706 bp
Protein-coding Genes
4263 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | LV84_01077 | Not Available | Positive | 1203160 - 1203651 | 19004.8 |
| putative outer membrane starch-binding protein | LV84_01078 | Not Available | Negative | 1203945 - 1205465 | 55049.3 |
| tonb-linked susc/raga family outer membrane protein | LV84_01079 | Not Available | Negative | 1205493 - 1208588 | 110881.0 |
| 2'-5' rna ligase | LV84_01080 | Not Available | Negative | 1209083 - 1209634 | 21573.8 |
| nucleotide-binding universal stress uspa family protein | LV84_01081 | Not Available | Positive | 1209953 - 1210867 | 34222.9 |
| methyltransferase family protein | LV84_01082 | Not Available | Positive | 1211195 - 1211866 | 26171.2 |
| abc transporter fused permease/atp-binding protein | LV84_01083 | Not Available | Negative | 1211863 - 1213650 | 65984.6 |
| hypothetical protein | LV84_01084 | Not Available | Negative | 1214058 - 1214660 | 23044.0 |
| lipoprotein-releasing system permease protein | LV84_01085 | Not Available | Negative | 1214895 - 1216040 | 41926.4 |
| ribosome-binding factor a | LV84_01086 | Not Available | Negative | 1216136 - 1216522 | 14659.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
