Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus ratkowskyi |
| Strain | strain DSM 22686 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | saline lake cyanobacterial mats; sea ice |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1516046 bp
Thymine Count
1505068 bp
Guanine Count
980277 bp
Cytosine Count
983951 bp
Genome Length
4994706 bp
Protein-coding Genes
4263 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| single-stranded-dna-specific exonuclease | LV84_01057 | Not Available | Negative | 1179593 - 1181317 | 64369.6 |
| hypothetical protein | LV84_01058 | Not Available | Negative | 1181421 - 1181609 | 7353.2 |
| ribosomal protein l11 methyltransferase | LV84_01059 | Not Available | Negative | 1181789 - 1182616 | 31095.9 |
| triosephosphate isomerase | LV84_01060 | Not Available | Negative | 1182623 - 1183384 | 27644.1 |
| regulatory protein | LV84_01061 | Not Available | Positive | 1183457 - 1183972 | 20575.4 |
| hypothetical protein | LV84_01062 | Not Available | Positive | 1184239 - 1185051 | 30710.4 |
| fkbp-type peptidyl-prolyl cis-trans isomerase slyd | LV84_01063 | Not Available | Negative | 1185341 - 1185859 | 19325.0 |
| capsule assembly protein wzi | LV84_01064 | Not Available | Negative | 1185880 - 1187592 | 65626.9 |
| hypothetical protein | LV84_01065 | Not Available | Negative | 1187589 - 1188254 | 24639.8 |
| udp-n-acetylglucosamine 2-epimerase (non-hydrolysing) | LV84_01066 | Not Available | Positive | 1188393 - 1189493 | 40531.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
