Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus ratkowskyi |
| Strain | strain DSM 22686 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | saline lake cyanobacterial mats; sea ice |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1516046 bp
Thymine Count
1505068 bp
Guanine Count
980277 bp
Cytosine Count
983951 bp
Genome Length
4994706 bp
Protein-coding Genes
4263 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| molecular chaperone htpg | LV84_01047 | Not Available | Negative | 1169593 - 1171479 | 71435.9 |
| heme exporter protein b | LV84_01048 | Not Available | Positive | 1171655 - 1172320 | 24198.3 |
| hypothetical protein | LV84_01049 | Not Available | Negative | 1172438 - 1172830 | 15030.0 |
| vapb protein of antitoxin of type ii toxin-antitoxin system | LV84_01050 | Not Available | Negative | 1172827 - 1173021 | 7472.25 |
| heme exporter protein c | LV84_01051 | Not Available | Positive | 1173252 - 1173926 | 25661.9 |
| ccmd family protein | LV84_01052 | Not Available | Positive | 1173930 - 1174172 | 8815.03 |
| cytochrome c-type biogenesis protein ccme | LV84_01053 | Not Available | Positive | 1174277 - 1174693 | 15221.2 |
| cytochrome c-type biogenesis protein ccmf | LV84_01054 | Not Available | Positive | 1174721 - 1177243 | 95237.8 |
| gh3 auxin-responsive promoter | LV84_01055 | Not Available | Negative | 1177322 - 1178854 | 58164.2 |
| lipopolysaccharide export system atp-binding protein | LV84_01056 | Not Available | Negative | 1178854 - 1179591 | 27391.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
